A community effort to collect a curated set of analysis pipelines built using Nextflow.

nf-core

OK, back to picking away this after parental leave!

<@UEM37TBAR> If there is an issue that I can help with let me know.  I have not worked on this pipeline in a while :sweat_smile:

First there is the PR I asked for a review for ganon :slightly_smiling_face:

<https://github.com/nf-core/modules/pull/6748>

One half easy one would be: <https://github.com/nf-core/createtaxdb/issues/32>

But would need to think the best way to do this

Whether we just allow the user to give a string or whatever they want

Or we are stricter and have one-to-one mappings of a pipelien flag to a tool flag