Hi, I am trying to use airrflow to analyze my single cell TCR data. But each sample was sequenced for multiple lanes from 1-8. What is the best practice to analyze these samples with multiple lanes for each sample, or just cat each sample with multiple lanes together for R1 and R2 respectively? Thanks!

Hi Jin, Rows in the samplesheet with identical values for the required columns (filenames can be different of course) will be merged before assembly. I think that's what you are looking for.

Thanks for the suggestion.