Hi <!subteam^S016E36N7TQ>,
At this point, I think we’ve finished the bulk of the development for the initial release for scnanoseq and are looking to begin the process of official release. We do have a couple lingering questions as we are reaching this point:
• How do we begin the process of the final review for the first release? I know there was mention of just doing a branch into dev and post in #CQY2U5QU9 but wanted to double check that
• One of the tools we use we have temporarily placed in our pipeline in order to resolve an issue with the tool. The tool owner has accepted our change into a branch in the tool’s main repo and we are just waiting for it to be merged and re-released. Is there any issue with this approach with regards to the nf-core guidelines that we need to consider?
We are still working behind the scenes to finalize validations and begin the process of benchmarking for the paper we plan to publish for this pipeline, and will continue to monitor and clean up, so any and all help is greatly appreciated!
(Also as a side note, we are currently investigating the errors with the CI. We’ll post in one of the help channels if we can’t resolve it, but wanted to go ahead and post this bigger question while we work on the resolution)