A community effort to collect a curated set of analysis pipelines built using Nextflow.

nf-core

Since I had been working on an old repo for a while and we also have a new name for the pipeline, I am going to switch over all the code to a new repo with the new name.  It will make linting easier too

Sounds good! As there's no nf-core repo yet (right?) it shouldn't present any problems.

Note that, at least with fairly recent versions of the template, it should be quite easy to change the name. Just change the name in the `.nf-core.yml`  file and run `nf-core sync`

But if the pipeline is a bit dated / behind on nf-core template updates or has other issues, starting fresh is often a good idea :+1::skin-tone-2:

(As long as you don't mind losing the commit history)

awesome, thank you.
that's right - there is no nf-core repo yet