I have pipeline tests failing with `files_unchange...
# linting
c
I have pipeline tests failing with
files_unchanged: docs/images/nf-core-pairalign_logo_light.png does not match the template
but the file is the same in the
dev
and
TEMPLATE
branches.
Copy code
[charles-plessy@deigo-login3 pairwiseGenomeComparison]$ git checkout dev 
Switched to branch 'dev'
Your branch is up to date with 'origin/dev'.
[charles-plessy@deigo-login3 pairwiseGenomeComparison]$ md5sum docs/images/nf-core-pairalign_logo_light.png 
93d9984e34c1229e89108bca3e951eb3  docs/images/nf-core-pairalign_logo_light.png

[charles-plessy@deigo-login3 pairwiseGenomeComparison]$ git checkout TEMPLATE 
Switched to branch 'TEMPLATE'
Your branch is up to date with 'origin/TEMPLATE'.
[charles-plessy@deigo-login3 pairwiseGenomeComparison]$ md5sum docs/images/nf-core-pairalign_logo_light.png 
93d9984e34c1229e89108bca3e951eb3  docs/images/nf-core-pairalign_logo_light.png
Can somebody explain me what the problem is? https://github.com/oist/plessy_pairwiseGenomeComparison/actions/runs/8844761180/job/24287262701
j
@mashehu one for you I guess
m
is
origin
your fork or the nf-core repo? we compare to the nf-core repo branch
c
I think that I do not have a nf-core repo yet. We are building the pipeline and were planning to hand it over to nf-core once it is done.
Or shall I go ahead and push a nf-core/pairgenomealign repository? I do not have permission to create
nf-core/pairgenomealign
myself.
m
ah, okay, I thought this was an nf-core pipeline. you are using 2.13.1 of nf-core tools?
c
Yes, 2.13.1
m
I will try to have a look.
👍 1
in the mean time, could you try to start a github workspace in the repo and try to create the logo there (
nf-core create-logo pairaling
and
nf-core create-logo pairaling --theme dark
)
c
I have re-created the logos in the
dev
and
TEMPLATE
branches but the problem persists.
m
okay, I thinkg the problem was the extra long logo, so needed to specify
--width 600
to recreate the template logo, hopefully this resolves this issue. Sorry for that https://github.com/oist/plessy_pairwiseGenomeComparison/pull/25