Hi all (sorry for x-posting!)
nf-core recently
announced a new initiative called 'special interest groups'.
We have quite a few pipelines related to metagenomics (in a broad sense)/microbial(?) ecology, and I was wondered if anyone would be interested in setting up a SIG along those lines? Related pipelines as compiled by myself and
@Carson Miller are:
#CEA7TBJGJ,
#C02FC6VFQG1,
#C06316EFZSQ,
#C02K5GX2W93,
#CEQBS091V,
#CE9MS66BS,
#C031QH57DSS,
#CJDV0UWH2,
#C062H82UCRG,
#C05E9C2B2BG,
#C01U1E95JQ5
For example, I would be motivated to have a SIG for cross-pipeline discussions and coordination on how to integrate/chain the different pipelines together. Another possible discussion is if we can come up with 'standard' databases a la iGenomes we could build/ship etc.
Please leave a 🥚 on this post if you would be interested in being in such a SIG, and if you have any thoughts of what you would like to get out of such a group, please leave a comment under the post 🙂.
One important thing though is given I'm already on the core, maintainers, team and developing 4 pipelines (alongside my other 'real job' tasks), I need to balance my responsibilities 😬 .so I would like to find a couple of co-leads to help with it 🙂