``` RUN PIPELINE nextflow run nf core mnaseseq r dev input d nf-core #mnaseseq

```## RUN PIPELINE nextflow run nf-core/mnaseseq \...

Chris Cheshire

02/14/2020, 12:03 PM

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## RUN PIPELINE
nextflow run nf-core/mnaseseq \
  -r dev
  --input "design.csv" \
  -profile crick \
  --email <mailto:chris.cheshire@crick.ac.uk|chris.cheshire@crick.ac.uk> \
  --genome BDGP6 \
  --save_reference \
  -resume

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